Index

A B C D E F G H I J L M N O P R S T U V W X Z

A

Action<T extends Agent<?>> - Class in simudyne.core.abm
Action(Class<T>, SerializableConsumer<T>) - Constructor for class simudyne.core.abm.Action
action(Class<T>, SerializableConsumer<T>) - Method in class simudyne.core.abm.Section: Fluent method for adding a step to a Section to create a new Sequence
action(Action) - Method in class simudyne.core.abm.Section: Fluent method for adding an existing Step to a Section to create a new Sequence
action(Class<T>, SerializableConsumer<T>) - Method in class simudyne.core.abm.Sequence: Extends this sequence with a new action, returning a new sequence (and not modifying the existing sequence).
action(Action) - Method in class simudyne.core.abm.Sequence: Extends this sequence with an existing action, returning a new sequence (and not modifying the existing sequence).
add(double) - Method in interface simudyne.core.graph.DoubleAccumulator
add(long) - Method in interface simudyne.core.graph.LongAccumulator
add(String) - Method in class simudyne.core.runner.ModelAggregator
add(ValueRecord) - Method in class simudyne.core.runner.ModelRecordAggregator
add(T) - Method in class simudyne.core.values.ValueArray
add(ValueNode) - Method in class simudyne.core.values.ValueRecord
addAll(List<T>) - Method in class simudyne.core.values.ValueArray
addAll(Collection<ValueNode>) - Method in class simudyne.core.values.ValueRecord
addField(String, T) - Method in class simudyne.core.values.ValueRecord
addLink(long, Class<L>) - Method in interface simudyne.core.graph.LinksApi: Vertex.addLink(long, Class, Consumer) without a data injector so no initial function is run for links.
addLink(long, Class<L>, Consumer<L>) - Method in interface simudyne.core.graph.LinksApi: Create a new link from this vertex to the target vertexID, with the given associated data.
addLink(long, Class<L>) - Method in class simudyne.core.graph.Vertex: Vertex.addLink(long, Class, Consumer) without a data injector so no initial function is run for links.
addLink(long, Class<L>, Consumer<L>) - Method in class simudyne.core.graph.Vertex: Create a new link from this vertex to the target vertexID, with the given associated data.
addLinks(Collection<Long>, Class<L>) - Method in interface simudyne.core.graph.LinksApi: Vertex.addLinks(Collection, Class) without a data injector so no initial function is run for links.
addLinks(Collection<Long>, Class<L>, Consumer<L>) - Method in interface simudyne.core.graph.LinksApi: Create a new link from this vertex to a group of target vertexIDs, with the given associated data.
addLinks(Collection<Long>, Class<L>) - Method in class simudyne.core.graph.Vertex: Vertex.addLinks(Collection, Class) without a data injector so no initial function is run for links.
addLinks(Collection<Long>, Class<L>, Consumer<L>) - Method in class simudyne.core.graph.Vertex: Create a new link from this vertex to a group of target vertexIDs, with the given associated data.
addVertices(Class<T>, long) - Method in interface simudyne.core.graph.Graph: Add a number of agents to the system.
addVertices(Class<T>, long, SerializableBiConsumer<InitContext, T>) - Method in interface simudyne.core.graph.Graph: Add a number of agents to the system.
Agent<S extends GlobalState> - Class in simudyne.core.abm
Agent() - Constructor for class simudyne.core.abm.Agent
AgentBasedModel<T extends GlobalState> - Class in simudyne.core.abm
AgentBasedModel() - Constructor for class simudyne.core.abm.AgentBasedModel
AgentSelection<T extends Agent<? extends GlobalState>> - Interface in simudyne.core.abm: An AgentSelection represents a selection of agents from an AgentSystem for the purposes of aggregation.
AgentStatistics<T extends Agent<? extends GlobalState>> - Interface in simudyne.core.abm.stats: AgentStatistics provides a wrapper around VertexAggregator and Graph.selectVertices(Class) that can be customised to provide attribute level statistics via SummaryStatistics.
AgentStatisticsResult<T extends Vertex> - Interface in simudyne.core.abm.stats
AgentSystem<S extends GlobalState> - Interface in simudyne.core.abm
aggregate(SerializableSupplier<S>) - Method in interface simudyne.core.graph.VertexSelection: Runs a custom aggregation over this selection.

B

BananaTree<A extends Agent<?>,L extends Link> - Class in simudyne.core.abm.connectors: Banana tree generator.
BananaTree(Class<L>, SerializableBiConsumer<A, L>, int) - Constructor for class simudyne.core.abm.connectors.BananaTree
bananaTreeConnected(int, Class<L>) - Method in interface simudyne.core.abm.Group: Group.bananaTreeConnected(int, Class, SerializableBiConsumer) without a data injector so no initial function is run for links.
bananaTreeConnected(int, Class<L>, SerializableBiConsumer<A, L>) - Method in interface simudyne.core.abm.Group: Connect agents within this group using the GridConnected strategy.
beginStep() - Method in interface simudyne.core.abm.AgentSystem: reset all the accumulator that haven't been flagged as persistent
beginStep() - Method in interface simudyne.core.graph.Graph: reset all the accumulator that haven't been flagged as persistent
beta(double, double) - Method in class simudyne.core.rng.SeededRandom: Returns a generator for the Beta distribution with given parameters.
bidirectional() - Method in class simudyne.core.abm.connectors.RingConnected
binomial(int, double) - Method in class simudyne.core.rng.SeededRandom: Returns a generator for the Binomial distribution with given parameters.
Boolean() - Constructor for class simudyne.core.graph.Message.Boolean

C

cancelRun() - Method in interface simudyne.core.runner.ModelRunner: If an async simulation is running, stop it.
cauchy(double, double) - Method in class simudyne.core.rng.SeededRandom: Returns a generator for the Cauchy distribution with given parameters.
centered() - Method in class simudyne.core.abm.connectors.BananaTree
chiSquared(double) - Method in class simudyne.core.rng.SeededRandom: Returns a generator for the Chi Squared distribution with given degrees of freedom.
connect(Group<?>, C) - Method in interface simudyne.core.abm.Group: Connect this group to a target group using connection rules defined in a Connector
connectAgent(A, GroupInformation, GroupInformation) - Method in class simudyne.core.abm.connectors.BananaTree
connectAgent(A, GroupInformation, GroupInformation) - Method in interface simudyne.core.abm.connectors.Connector: The method that creates links between the agent whose `agentInit` is in charge of.
connectAgent(A, GroupInformation, GroupInformation) - Method in class simudyne.core.abm.connectors.FullyConnected
connectAgent(A, GroupInformation, GroupInformation) - Method in class simudyne.core.abm.connectors.GraphConnector
connectAgent(A, GroupInformation, GroupInformation) - Method in class simudyne.core.abm.connectors.GridConnected
connectAgent(A, GroupInformation, GroupInformation) - Method in class simudyne.core.abm.connectors.PartitionConnected
connectAgent(A, GroupInformation, GroupInformation) - Method in class simudyne.core.abm.connectors.RingConnected
connectAgent(A, GroupInformation, GroupInformation) - Method in class simudyne.core.abm.connectors.SmallWorld
Connector<A extends Agent<?>> - Interface in simudyne.core.abm.connectors: A Linker used to define a graph topology between two groups of agents, ie links to create between them.
Constant - Annotation Type in simudyne.core.annotations: Marks a field as a Constant.
copy(List<T>) - Method in class simudyne.core.values.ValueArray
copy(String) - Method in class simudyne.core.values.ValueArray
copy(String) - Method in class simudyne.core.values.ValueField
copy(List<ValueNode>) - Method in class simudyne.core.values.ValueRecord
copy(String) - Method in class simudyne.core.values.ValueRecord
count() - Method in interface simudyne.core.graph.DoubleAccumulator
count() - Method in interface simudyne.core.graph.LongAccumulator
count() - Method in interface simudyne.core.graph.VertexSelection: Counts the number of agents in the selection.
create(Class<T>, SerializableConsumer<T>) - Static method in class simudyne.core.abm.Action: Create a new action for the given Agent class.
create(S) - Static method in interface simudyne.core.abm.AgentSystem
create() - Static method in interface simudyne.core.abm.AgentSystem
create(Section...) - Static method in class simudyne.core.abm.Sequence
create(Section...) - Static method in class simudyne.core.abm.Split
create(S) - Static method in interface simudyne.core.graph.Graph: Create a new AgentSystem instance.
create(long) - Static method in class simudyne.core.rng.SeededRandom
create() - Static method in class simudyne.core.rng.SeededRandom: Create SeededRandom using seed set in SimudyneSDK.properties config file
create() - Static method in interface simudyne.core.runner.RunnerBackend
createDoubleAccumulator(String, String) - Method in class simudyne.core.abm.AgentBasedModel: Create a DoubleAccumulator.
createDoubleAccumulator(String) - Method in class simudyne.core.abm.AgentBasedModel: AgentBasedModel.createDoubleAccumulator(String, String) using the name for reporting purposes.
createDoubleAccumulator(String) - Method in interface simudyne.core.abm.AgentSystem: AgentSystem.createDoubleAccumulator(String, String) using the name for reporting purposes.
createDoubleAccumulator(String, String) - Method in interface simudyne.core.abm.AgentSystem: Create a DoubleAccumulator.
createDoubleAccumulator(String, String) - Method in interface simudyne.core.graph.Graph: Create a new DoubleAccumulator on the AgentSystem.
createGenerator(long) - Static method in class simudyne.core.rng.SeededRandom
createGraph(GraphConfiguration, S) - Method in interface simudyne.core.graph.GraphBackend
createHarness() - Method in interface simudyne.core.descriptors.ModelDescriptor
createLink(long, A, Class<L>, SerializableBiConsumer<A, L>) - Static method in interface simudyne.core.abm.connectors.Connector
createLinks(Collection<Long>, A, Class<L>, SerializableBiConsumer<A, L>) - Static method in interface simudyne.core.abm.connectors.Connector
createLongAccumulator(String, String) - Method in class simudyne.core.abm.AgentBasedModel: Create a LongAccumulator.
createLongAccumulator(String) - Method in class simudyne.core.abm.AgentBasedModel: AgentBasedModel.createLongAccumulator(String, String) using the name for reporting purposes.
createLongAccumulator(String) - Method in interface simudyne.core.abm.AgentSystem: AgentSystem.createLongAccumulator(String, String) using the name for reporting purposes.
createLongAccumulator(String, String) - Method in interface simudyne.core.abm.AgentSystem: Create a LongAccumulator.
createLongAccumulator(String, String) - Method in interface simudyne.core.graph.Graph: Create a new LongAccumulator on the AgentSystem.
CSVSource - Class in simudyne.core.data
CSVSource(String) - Constructor for class simudyne.core.data.CSVSource
Custom - Annotation Type in simudyne.core.annotations: Marks a field or method as a Variable.

D

DataConnector<A extends Agent<?>,L extends Link> - Interface in simudyne.core.abm.connectors: A Connector that creates connections between groups based on data.
DataExportMultirunException - Exception in simudyne.core.exceptions
DataExportMultirunException() - Constructor for exception simudyne.core.exceptions.DataExportMultirunException
deferMessages(List<Message>) - Method in class simudyne.core.abm.Agent
deferMessages(List<Message>) - Method in interface simudyne.core.graph.Environment: Postpone messages to be handled later.
deferMessages(Class<T>) - Method in interface simudyne.core.graph.Environment: Postpone messages of the given type to be handled later.
deliverMessage(Message) - Method in class simudyne.core.abm.Agent
deliverMessage(Message) - Method in interface simudyne.core.graph.Environment
discrete(int, int) - Method in class simudyne.core.rng.SeededRandom: Returns a generator of integer values in the range lower <= n <= upper
dispose() - Method in class simudyne.core.graph.Vertex
dispose() - Method in interface simudyne.core.harness.ModelHarness
dispose() - Method in interface simudyne.core.Model: An optional lifecycle point triggered when a model is restarted or explicitly closed.
Double() - Constructor for class simudyne.core.graph.Message.Double
DoubleAccumulator - Interface in simudyne.core.graph

E

emitJSON(JsonNodeFactory, ModelExecutionPhase) - Method in class simudyne.core.abm.GlobalState
emitJSON(JsonNodeFactory, ModelExecutionPhase) - Method in interface simudyne.core.JSONValue: Defines the result of reading this datatype as JSON.
Empty() - Constructor for class simudyne.core.graph.Link.Empty
Empty() - Constructor for class simudyne.core.graph.Message.Empty
emptyBiConsumer - Static variable in class simudyne.core.util.JavaUtil
emptyPredicate - Static variable in class simudyne.core.util.JavaUtil
enumeratedInteger(int[], double[]) - Method in class simudyne.core.rng.SeededRandom: Returns a generator for the Enumerated Integer distribution, with given parameters.
enumeratedReal(double[], double[]) - Method in class simudyne.core.rng.SeededRandom: Returns a generator for the Enumerated Real distribution, with given parameters.
Environment<S extends java.io.Serializable> - Interface in simudyne.core.graph
equals(Object) - Method in class simudyne.core.values.ValueField
equals(Object) - Method in class simudyne.core.values.ValueRecord
execute(T) - Method in class simudyne.core.abm.Action
exponential(double) - Method in class simudyne.core.rng.SeededRandom: Returns a generator for the Exponential distribution with given mean.
exportData(String) - Method in interface simudyne.core.harness.ModelHarness

F

f(double, double) - Method in class simudyne.core.rng.SeededRandom: Returns a generator for the F Distribution with given degrees of freedom.
field(String, SerializableFunction<T, Number>) - Method in interface simudyne.core.abm.stats.AgentStatistics: Define a field to collect statistics for.
filter(SerializablePredicate<T>) - Method in interface simudyne.core.abm.AgentSelection
filter(SerializablePredicate<T>) - Method in interface simudyne.core.abm.stats.AgentStatistics
filter(Predicate<? super L>) - Method in interface simudyne.core.graph.FilteredLinks
filter(Predicate<? super L>) - Method in class simudyne.core.graph.LinkList
filter(SerializablePredicate<T>) - Method in interface simudyne.core.graph.VertexSelection: Applies a filter to this selection.
FilteredLinks<L extends Link> - Interface in simudyne.core.graph: A LinkList is used to store a list of links of a specific class.
Float() - Constructor for class simudyne.core.graph.Message.Float
forConfig(ModelDescriptor) - Method in interface simudyne.core.runner.RunnerBackend: Set model configuration to run the simulation for.
forEach(Consumer<? super L>) - Method in interface simudyne.core.graph.FilteredLinks
forEach(Consumer<? super L>) - Method in class simudyne.core.graph.LinkList
forModel(Class) - Method in interface simudyne.core.runner.RunnerBackend: Set POJO model to run simulation for.
forRuns(long) - Method in interface simudyne.core.runner.ModelRunner: Set number of times to run the simulation.
forSource(Source) - Static method in interface simudyne.core.data.graph.GraphMetricsExtractor: Return a GraphMetricsExtractor for the provided source.
forSource(Source, String, String) - Static method in interface simudyne.core.data.graph.GraphMetricsExtractor: Return a GraphMetricsExtractor for the provided source.
forTicks(int) - Method in interface simudyne.core.runner.ModelRunner: Set number of ticks to run simulation for.
FullyConnected<A extends Agent<?>,L extends Link> - Class in simudyne.core.abm.connectors: The strategy used to connect all agents from one group to the other : each agent from the source group is being connected to all the agent is the target group.
FullyConnected(Class<L>, SerializableBiConsumer<A, L>) - Constructor for class simudyne.core.abm.connectors.FullyConnected
fullyConnected(Group<?>, Class<L>) - Method in interface simudyne.core.abm.Group: Group.fullyConnected(Group, Class, SerializableBiConsumer) without a data injector so no initial function is run for links
fullyConnected(Group<?>, Class<L>, SerializableBiConsumer<A, L>) - Method in interface simudyne.core.abm.Group: Connect this group to a target group using the FullyConnected strategy.

G

gamma(double, double) - Method in class simudyne.core.rng.SeededRandom: Returns a generator for the Gamma distribution with given parameters.
gaussian(double, double) - Method in class simudyne.core.rng.SeededRandom: Returns a generator for the Gaussian (or Normal) distribution with given parameters.
generateGroup(Class<A>, long) - Method in class simudyne.core.abm.AgentBasedModel: AgentBasedModel.generateGroup(Class, long, SerializableConsumer) without a data injector so no initial function is run for agents
generateGroup(Class<A>, long, SerializableConsumer<A>) - Method in class simudyne.core.abm.AgentBasedModel: Create a Group of agents.
generateGroup(Class<T>, long) - Method in interface simudyne.core.abm.AgentSystem: AgentSystem.generateGroup(Class, long, SerializableConsumer) without a data injector so no initial function is run for agents
generateGroup(Class<T>, long, SerializableConsumer<T>) - Method in interface simudyne.core.abm.AgentSystem: Create a Group of agents.
generator - Variable in class simudyne.core.rng.SeededRandom
geometric(double) - Method in class simudyne.core.rng.SeededRandom: Returns a generator for the Geometric distribution with given parameter.
get() - Static method in class simudyne.core.config.ModelConfig
get(int) - Method in interface simudyne.core.graph.FilteredLinks
get(int) - Method in class simudyne.core.graph.LinkList
get(String) - Method in interface simudyne.core.runner.RunResult: Get aggregated data for a specific variable as a as VariableResult object
get(List<String>) - Method in interface simudyne.core.runner.RunResult: Get aggregated data for a specific variable as a as VariableResult object
getAgentID(String) - Method in interface simudyne.core.abm.connectors.GroupInformation
getAggregatedData() - Method in class simudyne.core.runner.ModelAggregator: Get all model aggregated data as a JSON string
getAggregatedRecord() - Method in class simudyne.core.runner.ModelRecordAggregator
getAggregatedStats() - Method in interface simudyne.core.runner.VariableResult: Merge all tick values into a single DescriptiveStatistics for whole run
getBackendGraph() - Method in interface simudyne.core.abm.AgentSystem
getBaseID() - Method in interface simudyne.core.abm.connectors.GroupInformation
getBody() - Method in class simudyne.core.graph.Message.Boolean
getBody() - Method in class simudyne.core.graph.Message.Double
getBody() - Method in class simudyne.core.graph.Message.Float
getBody() - Method in class simudyne.core.graph.Message.Integer
getBody() - Method in class simudyne.core.graph.Message.Long
getBody() - Method in class simudyne.core.graph.Message.Object
getBoolean(String, boolean) - Method in class simudyne.core.config.ModelConfig
getChildren() - Method in class simudyne.core.values.ValueRecord
getClusteringCoefficientDistribution() - Method in interface simudyne.core.data.graph.GraphMetricsExtractor
getCompletedResults() - Method in interface simudyne.core.runner.ModelRunner: Wait for an async simulation to complete and get results.
getConfig() - Method in interface simudyne.core.Model
getCurrentTime() - Method in interface simudyne.core.harness.ModelHarness
getDataExporter(String) - Method in interface simudyne.core.harness.ModelHarness
getDegreeDistribution() - Method in interface simudyne.core.data.graph.GraphMetricsExtractor
getDoubleAccumulator(String) - Method in class simudyne.core.abm.Agent
getDoubleAccumulator(String) - Method in class simudyne.core.abm.AgentBasedModel
getDoubleAccumulator(String) - Method in interface simudyne.core.abm.AgentSystem
getDoubleAccumulator(String) - Method in interface simudyne.core.graph.Environment: Gets a previously created Double Accumulator
getDoubleAccumulator(String) - Method in interface simudyne.core.graph.Graph: Get a previously created DoubleAccumulator
getDoubleAccumulators() - Method in interface simudyne.core.abm.AgentSystem
getDoubleAccumulators() - Method in interface simudyne.core.graph.Graph: Get all previously created DoubleAccumulator as a read only map.
getExportPath() - Method in interface simudyne.core.runner.ModelRunner: Get sub directory where to export this models data.
getField(String) - Method in interface simudyne.core.abm.stats.AgentStatisticsResult
getFieldNames() - Method in interface simudyne.core.abm.stats.AgentStatisticsResult
getGlobals() - Method in class simudyne.core.abm.Agent
getGlobals() - Method in class simudyne.core.abm.AgentBasedModel
getGlobals() - Method in interface simudyne.core.abm.AgentSystem
getGlobals() - Method in interface simudyne.core.graph.Environment: Get a global value that the system has broadcast to all vertices.
getGlobals() - Method in interface simudyne.core.graph.Graph: Get the value of the global state that can be read globally by agents.
getGroupPosition() - Method in class simudyne.core.abm.Agent
getID() - Method in class simudyne.core.graph.Vertex
getIdentifier() - Method in interface simudyne.core.descriptors.ModelDescriptor
getIDStream() - Method in interface simudyne.core.abm.connectors.GroupInformation
getInt(String, int) - Method in class simudyne.core.config.ModelConfig
getItems() - Method in class simudyne.core.values.ValueArray
getLinks(Class<L>) - Method in interface simudyne.core.graph.LinksApi: Get the vertex's links of the given type.
getLinks() - Method in interface simudyne.core.graph.LinksApi: Get all of the vertex's links.
getLinks() - Method in class simudyne.core.graph.Vertex: Get all of the vertex's links.
getLinks(Class<L>) - Method in class simudyne.core.graph.Vertex: Get the vertex's links of the given type.
getLinksTo(long) - Method in interface simudyne.core.graph.LinksApi: Get the vertex's links to the given target ID.
getLinksTo(long, Class<L>) - Method in interface simudyne.core.graph.LinksApi: Get the vertex's links of specified class to the given target ID.
getLinksTo(long) - Method in class simudyne.core.graph.Vertex: Get the vertex's links to the given target ID.
getLinksTo(long, Class<L>) - Method in class simudyne.core.graph.Vertex: Get the vertex's links of specified class to the given target ID.
getList() - Method in interface simudyne.core.graph.FilteredLinks
getList() - Method in class simudyne.core.graph.LinkList
getLong(String, long) - Method in class simudyne.core.config.ModelConfig
getLongAccumulator(String) - Method in class simudyne.core.abm.Agent
getLongAccumulator(String) - Method in class simudyne.core.abm.AgentBasedModel
getLongAccumulator(String) - Method in interface simudyne.core.abm.AgentSystem
getLongAccumulator(String) - Method in interface simudyne.core.graph.Environment: Gets a previously created Long Accumulator
getLongAccumulator(String) - Method in interface simudyne.core.graph.Graph: Get a previously created LongAccumulator
getLongAccumulators() - Method in interface simudyne.core.abm.AgentSystem
getLongAccumulators() - Method in interface simudyne.core.graph.Graph: Get all previously created LongAccumulator as a read only map.
getMessageIterator() - Method in class simudyne.core.abm.Agent
getMessageIterator() - Method in interface simudyne.core.graph.Environment
getMessageOfType(Class<T>) - Method in interface simudyne.core.graph.Environment
getMessagesOfType(Class<T>) - Method in class simudyne.core.abm.Agent
getMessagesOfType(Class<T>) - Method in interface simudyne.core.graph.Environment
getMessageTag() - Method in class simudyne.core.abm.Agent
getMessageTag() - Method in interface simudyne.core.graph.Environment
getModelEnd() - Method in interface simudyne.core.harness.ModelHarness
getName() - Method in interface simudyne.core.descriptors.ModelDescriptor
getName() - Method in class simudyne.core.values.ValueArray
getName() - Method in class simudyne.core.values.ValueField
getName() - Method in interface simudyne.core.values.ValueNode
getName() - Method in class simudyne.core.values.ValueRecord
getNbEdges() - Method in interface simudyne.core.data.graph.GraphMetricsExtractor
getNbNodes() - Method in interface simudyne.core.data.graph.GraphMetricsExtractor
getNextVertexID() - Method in interface simudyne.core.graph.Graph: Returns the next agent ID that will be assigned via Graph.addVertices(java.lang.Class<T>, long).
getOrSetBoolean(String, boolean) - Method in class simudyne.core.config.ModelConfig
getOrSetInt(String, int) - Method in class simudyne.core.config.ModelConfig
getOrSetLong(String, long) - Method in class simudyne.core.config.ModelConfig
getOrSetString(String, String) - Method in class simudyne.core.config.ModelConfig
getPhase() - Method in interface simudyne.core.harness.ModelHarness
getPhaseCount() - Method in class simudyne.core.abm.Agent
getPhaseCount() - Method in interface simudyne.core.graph.Environment
getPopulation() - Method in interface simudyne.core.abm.connectors.GroupInformation: Deprecated.
getPrimaryKey(long) - Method in interface simudyne.core.abm.connectors.GroupInformation
getPrng() - Method in class simudyne.core.graph.Vertex
getProgress() - Method in interface simudyne.core.runner.ModelRunner: Get the progress of an async running simulation
getProperties() - Method in class simudyne.core.config.ModelConfig
getRecord() - Method in class simudyne.core.abm.GlobalState
getRecord() - Method in interface simudyne.core.harness.ModelHarness
getRecord() - Method in interface simudyne.core.JSONValue: Defines schema for this data type.
getRecordResultsMap() - Method in interface simudyne.core.runner.RunResult
getResult(String) - Method in class simudyne.core.runner.ModelRecordAggregator: Get DescriptiveStatistics for specific variable
getResultsMap() - Method in interface simudyne.core.runner.RunResult: Get all results of multi run.
getRows() - Method in class simudyne.core.data.CSVSource
getRows() - Method in class simudyne.core.data.JDBCSource
getRows() - Method in interface simudyne.core.data.Source
getRuns() - Method in interface simudyne.core.runner.ModelRunner
getSchema(JsonNodeFactory) - Method in class simudyne.core.abm.GlobalState
getSchema(JsonNodeFactory) - Method in interface simudyne.core.graph.DoubleAccumulator
getSchema(JsonNodeFactory) - Method in interface simudyne.core.graph.LongAccumulator
getSchema() - Method in interface simudyne.core.harness.ModelHarness
getSchema(JsonNodeFactory) - Method in interface simudyne.core.JSONValue: Defines the avro schema for the result of reading this datatype as JSON.
getSchemaRecord() - Method in class simudyne.core.runner.ModelRecordAggregator
getSender() - Method in class simudyne.core.graph.Message
getSeqNumber() - Method in class simudyne.core.graph.InitContext
getSize() - Method in interface simudyne.core.abm.connectors.GroupInformation
getState() - Method in class simudyne.core.rng.XoRoShiRo128Plus
getStatsAtTick(long) - Method in interface simudyne.core.runner.VariableResult: Return DescriptiveStatistics for a specific tick
getString(String, String) - Method in class simudyne.core.config.ModelConfig
getSubtype() - Method in class simudyne.core.values.ValueArray
getSubtype() - Method in class simudyne.core.values.ValueRecord
getTick() - Method in interface simudyne.core.harness.ModelHarness
getTicks() - Method in interface simudyne.core.runner.ModelRunner
getTo() - Method in class simudyne.core.graph.Link
getTo() - Method in class simudyne.core.graph.Message
getValue() - Method in class simudyne.core.values.ValueField
getValues(ModelExecutionPhase) - Method in class simudyne.core.abm.GlobalState
getValues() - Method in interface simudyne.core.harness.ModelHarness
getValues(ModelExecutionPhase) - Method in interface simudyne.core.JSONValue: Defines values for this data type.
GlobalState - Class in simudyne.core.abm
GlobalState() - Constructor for class simudyne.core.abm.GlobalState
Graph<S extends java.io.Serializable> - Interface in simudyne.core.graph: An AgentSystem represents a system of interacting agents, which may have links between one another, forming a topology of relations between each other.
GraphBackend - Interface in simudyne.core.graph
graphConnected(IntegerDistribution, RealDistribution, Class<L>) - Method in interface simudyne.core.abm.Group: Group.graphConnected(IntegerDistribution, RealDistribution, Class, SerializableBiConsumer) without a data injector so no initial function is run for links.
graphConnected(IntegerDistribution, RealDistribution, Class<L>, SerializableBiConsumer<A, L>) - Method in interface simudyne.core.abm.Group
GraphConnector<A extends Agent<?>,L extends Link> - Class in simudyne.core.abm.connectors
GraphConnector(Class<L>, SerializableBiConsumer<A, L>, IntegerDistribution, RealDistribution) - Constructor for class simudyne.core.abm.connectors.GraphConnector
GraphDuplicateFieldsException - Exception in simudyne.core.graph
GraphDuplicateFieldsException(String) - Constructor for exception simudyne.core.graph.GraphDuplicateFieldsException
GraphMetricsExtractor - Interface in simudyne.core.data.graph: A tool to extract the properties of a graph from a source.
GridConnected<A extends Agent<?>,L extends Link> - Class in simudyne.core.abm.connectors: The strategy used to create a connections between agents of a group on a 2D grid.
GridConnected(Class<L>, SerializableBiConsumer<A, L>) - Constructor for class simudyne.core.abm.connectors.GridConnected
gridConnected(Class<L>) - Method in interface simudyne.core.abm.Group: Group.gridConnected(Class, SerializableBiConsumer) without a data injector so no initial function is run for links.
gridConnected(Class<L>, SerializableBiConsumer<A, L>) - Method in interface simudyne.core.abm.Group: Connect agents within this group using the GridConnected strategy.
Group<A extends Agent<?>> - Interface in simudyne.core.abm: A group is a collection of Agents of a specific type that can be used to create links between agents in the group, and to agents in other groups.
GroupInformation - Interface in simudyne.core.abm.connectors: GroupInformation exposes a Group specific information.

H

hashCode() - Method in class simudyne.core.values.ValueField
hashCode() - Method in class simudyne.core.values.ValueRecord
hasLinks(Class<? extends Link>) - Method in interface simudyne.core.graph.LinksApi
hasLinks() - Method in class simudyne.core.graph.Vertex
hasLinks(Class<? extends Link>) - Method in class simudyne.core.graph.Vertex
hasLinksTo(long) - Method in interface simudyne.core.graph.LinksApi
hasLinksTo(long, Class<? extends Link>) - Method in interface simudyne.core.graph.LinksApi
hasLinksTo(long) - Method in class simudyne.core.graph.Vertex
hasLinksTo(long, Class<? extends Link>) - Method in class simudyne.core.graph.Vertex
hasMessageOfType(Class<T>, Consumer<T>) - Method in interface simudyne.core.graph.Environment: Query the vertex inbox for a message of the given type.
hasMessageOfType(Class<T>) - Method in interface simudyne.core.graph.Environment
hasMessagesOfType(Class<T>, Consumer<List<T>>) - Method in interface simudyne.core.graph.Environment: Query the vertex inbox for messages of the given type.
hasMessagesOfType(Class<T>) - Method in interface simudyne.core.graph.Environment
hypergeometric(int, int, int) - Method in class simudyne.core.rng.SeededRandom: Returns a generator for the Hypergeometric Distribution, with given parameters.

I

init() - Method in class simudyne.core.abm.Agent: Initialise the Agent.
init() - Method in class simudyne.core.graph.Link: Initialise the Link.
init() - Method in class simudyne.core.graph.Message: Initialise the Message.
InitContext - Class in simudyne.core.graph: InitContext provides information about the current context to create an agent.
InitContext(long) - Constructor for class simudyne.core.graph.InitContext
Input - Annotation Type in simudyne.core.annotations: Marks a field as an Input.
input(String) - Method in interface simudyne.core.harness.ModelHarness
Integer() - Constructor for class simudyne.core.graph.Message.Integer
isAutoCompiling() - Static method in class simudyne.nexus.Server: Returns true if auto-compilation has been enabled successfully.
isDistributed() - Method in interface simudyne.core.graph.GraphBackend
isEmpty() - Method in interface simudyne.core.graph.FilteredLinks
isEmpty() - Method in class simudyne.core.graph.LinkList
isField() - Method in class simudyne.core.values.ValueField
isField() - Method in interface simudyne.core.values.ValueNode
isLive() - Method in interface simudyne.core.descriptors.ModelDescriptor
isRecord() - Method in interface simudyne.core.values.ValueNode
isRecord() - Method in class simudyne.core.values.ValueRecord
isSetup() - Method in interface simudyne.core.graph.Graph

J

JavaUtil - Class in simudyne.core.util
JavaUtil() - Constructor for class simudyne.core.util.JavaUtil
JDBCSource - Class in simudyne.core.data
JDBCSource(String, String, String, String) - Constructor for class simudyne.core.data.JDBCSource
JDBCSource(String, String) - Constructor for class simudyne.core.data.JDBCSource
JSONValue - Interface in simudyne.core: The JSONValue interface allows the definition of custom types within Simudyne that can be read and written to via the JSON data format.

L

levy(double, double) - Method in class simudyne.core.rng.SeededRandom: Returns a generator for the Levy Distribution, with given parameters.
Link - Class in simudyne.core.graph
Link() - Constructor for class simudyne.core.graph.Link
Link.Empty - Class in simudyne.core.graph
LinkList<L extends Link> - Class in simudyne.core.graph
LinksApi - Interface in simudyne.core.graph
listEntries() - Method in interface simudyne.core.runner.RunResult: Get list of all variables statistics are being collected for
loadConnections(Group<?>, Class<L>, Source) - Method in interface simudyne.core.abm.Group: Group.loadConnections(Group, Class, Source, SerializableBiConsumer) without a data injector so no initial function is run for links
loadConnections(Group<?>, Class<L>, Source, SerializableBiConsumer<A, L>) - Method in interface simudyne.core.abm.Group: Connect this Group with another Group, using some data via a DataConnector.
loadGroup(Class<A>, Source) - Method in class simudyne.core.abm.AgentBasedModel: AgentBasedModel.loadGroup(Class, Source, SerializableConsumer) without a data injector so no initial function is run for agents
loadGroup(Class<A>, Source, SerializableConsumer<A>) - Method in class simudyne.core.abm.AgentBasedModel: Create a Group of agents using data loaded from a Source.
loadGroup(Class<T>, Source) - Method in interface simudyne.core.abm.AgentSystem: AgentSystem.loadGroup(Class, Source, SerializableConsumer) without a data injector so no initial function is run for agents
loadGroup(Class<T>, Source, SerializableConsumer<T>) - Method in interface simudyne.core.abm.AgentSystem: Create a Group of agents using data loaded from a Source.
logNormal(double, double) - Method in class simudyne.core.rng.SeededRandom: Returns a generator for the Log Normal distribution with given parameters.
Long() - Constructor for class simudyne.core.graph.Message.Long
LongAccumulator - Interface in simudyne.core.graph

M

mean() - Method in interface simudyne.core.graph.DoubleAccumulator
mean() - Method in interface simudyne.core.graph.LongAccumulator
merge(S) - Method in interface simudyne.core.graph.VertexAggregator: Given another aggregator of the same type, modify this aggregator's internal state to be the combination of the two.
merge(ValueRecord) - Method in class simudyne.core.values.ValueRecord
Message - Class in simudyne.core.graph
Message() - Constructor for class simudyne.core.graph.Message
Message.Boolean - Class in simudyne.core.graph: Message class that can be extended by messages that have a single boolean value.
Message.Double - Class in simudyne.core.graph: Message class that can be extended by messages that have a single double value.
Message.Empty - Class in simudyne.core.graph: Message class that can be extended by messages that have no values.
Message.Float - Class in simudyne.core.graph: Message class that can be extended by messages that have a single float value.
Message.Integer - Class in simudyne.core.graph: Message class that can be extended by messages that have a single integer value.
Message.Long - Class in simudyne.core.graph: Message class that can be extended by messages that have a single long value.
Message.Object<T> - Class in simudyne.core.graph: Message class that can be extended by messages that have a single integer value.
MessageNotSentException - Exception in simudyne.core.graph
MessageNotSentException(Class<M>) - Constructor for exception simudyne.core.graph.MessageNotSentException
Messaging<M extends Message> - Interface in simudyne.core.graph: The Messaging interface allows the setting up and sending messages to specific vertexes on the network.
mixtureMultivariateNormal(double[], double[][], double[][][]) - Method in class simudyne.core.rng.SeededRandom: Returns a generator for the Mixture Multivariate Normal Distribution.
Model - Interface in simudyne.core: The Model is the core abstraction around which the Simudyne engine is designed.
ModelAggregator - Class in simudyne.core.runner: ModelAggregator aggregates data from multiple model runs by variable name, and allows you to retrieve the results as DescriptiveStatistics
ModelAggregator(String, String) - Constructor for class simudyne.core.runner.ModelAggregator
ModelConfig - Class in simudyne.core.config
ModelConfig() - Constructor for class simudyne.core.config.ModelConfig
ModelConfig(InternalModelConfig) - Constructor for class simudyne.core.config.ModelConfig
ModelDescriptor - Interface in simudyne.core.descriptors
ModelExecutionPhase - Enum in simudyne.core: An enum representing the possible states of model execution.
ModelHarness - Interface in simudyne.core.harness
ModelRecordAggregator - Class in simudyne.core.runner
ModelRecordAggregator(String, SchemaRecord) - Constructor for class simudyne.core.runner.ModelRecordAggregator
ModelRunner - Interface in simudyne.core.runner: ModelRunner is used to setup and run a simulation to run for multiple runs.
ModelSettings - Annotation Type in simudyne.core.annotations: Specify the settings for a model.
mooreConnected() - Method in class simudyne.core.abm.connectors.GridConnected
mooreConnected(int) - Method in class simudyne.core.abm.connectors.GridConnected
multivariateNormal(double[], double[][]) - Method in class simudyne.core.rng.SeededRandom: Returns a generator for the Multivariate Normal Distribution

N

nextBoolean() - Method in class simudyne.core.rng.XoRoShiRo128Plus
nextBytes(byte[]) - Method in class simudyne.core.rng.XoRoShiRo128Plus
nextDouble() - Method in class simudyne.core.rng.XoRoShiRo128Plus
nextFloat() - Method in class simudyne.core.rng.XoRoShiRo128Plus
nextInt() - Method in class simudyne.core.rng.XoRoShiRo128Plus
nextLong() - Method in class simudyne.core.rng.XoRoShiRo128Plus
normal(double, double) - Method in class simudyne.core.rng.SeededRandom

O

Object() - Constructor for class simudyne.core.graph.Message.Object
observe(T) - Method in interface simudyne.core.graph.VertexAggregator: Take an observation of a single vertex of type T.
Output - Annotation Type in simudyne.core.annotations: Marks a field or method as an Output.

P

pareto(double, double) - Method in class simudyne.core.rng.SeededRandom: Returns a generator for the Pareto distribution with given parameters.
ParquetMultirunException - Exception in simudyne.core.exceptions
ParquetMultirunException() - Constructor for exception simudyne.core.exceptions.ParquetMultirunException
PartitionConnected<A extends Agent<?>,T extends Link> - Class in simudyne.core.abm.connectors
PartitionConnected(Class<T>, SerializableBiConsumer<A, T>) - Constructor for class simudyne.core.abm.connectors.PartitionConnected
partitionConnected(Group<?>, Class<L>) - Method in interface simudyne.core.abm.Group: Group.partitionConnected(Group, Class, SerializableBiConsumer) without a data injector so no initial function is run for links.
partitionConnected(Group<?>, Class<L>, SerializableBiConsumer<A, L>) - Method in interface simudyne.core.abm.Group: Connect this group to a target group using the PartitionConnected strategy.
pascal(int, double) - Method in class simudyne.core.rng.SeededRandom: Returns a generator for the Pascal Distribution
PoisonPill - Class in simudyne.core.abm.messages
PoisonPill() - Constructor for class simudyne.core.abm.messages.PoisonPill
poisson(double) - Method in class simudyne.core.rng.SeededRandom: Returns a generator for the Poisson distribution with given mean.

R

receiveJSON(JsonNode, ModelExecutionPhase) - Method in class simudyne.core.abm.GlobalState
receiveJSON(JsonNode, ModelExecutionPhase) - Method in interface simudyne.core.JSONValue: Allows the writing of JSON to this datatype.
register(String, ModelDescriptor) - Static method in class simudyne.nexus.Server: Register a user-created ModelConfiguration with the server.
register(String, Class<? extends Model>) - Static method in class simudyne.nexus.Server: Register a class implementing the [[simudyne.core.Model]] interface with the server.
registerAgentType(Class<? extends Vertex<T>>) - Method in class simudyne.core.abm.AgentBasedModel
registerAgentType(Class<? extends Vertex<S>>) - Method in interface simudyne.core.abm.AgentSystem
registerLinkTypes(Class...) - Method in class simudyne.core.abm.AgentBasedModel
registerLinkTypes(Class...) - Method in interface simudyne.core.abm.AgentSystem
registerLinkTypes(Class<? extends Link>...) - Method in interface simudyne.core.graph.Graph: Register link types with the system for serialisation.
registerLinkTypesContainer(Class) - Method in class simudyne.core.abm.AgentBasedModel
registerLinkTypesContainer(Class) - Method in interface simudyne.core.abm.AgentSystem
registerMessageTypes(Class...) - Method in class simudyne.core.abm.AgentBasedModel
registerMessageTypes(Class...) - Method in interface simudyne.core.abm.AgentSystem
registerMessageTypes(Class<? extends Message>...) - Method in interface simudyne.core.graph.Graph: Register message types with the system for serialisation.
registerMessageTypesContainer(Class) - Method in class simudyne.core.abm.AgentBasedModel
registerMessageTypesContainer(Class) - Method in interface simudyne.core.abm.AgentSystem
registerVertexType(Class<? extends Vertex<S>>) - Method in interface simudyne.core.graph.Graph: Register agent types with the system for serialisation.
remove() - Method in class simudyne.core.graph.Link: Remove this link.
removeLinks() - Method in interface simudyne.core.graph.LinksApi: Removes all the vertex's links.
removeLinks(Class<? extends Link>) - Method in interface simudyne.core.graph.LinksApi: Removes all vertex's links of a given type.
removeLinks() - Method in class simudyne.core.graph.Vertex: Removes all the vertex's links.
removeLinks(Class<? extends Link>) - Method in class simudyne.core.graph.Vertex: Removes all vertex's links of a given type.
removeLinksTo(long) - Method in interface simudyne.core.graph.LinksApi: Removes the vertex's links to a certain target ID.
removeLinksTo(long, Class<? extends Link>) - Method in interface simudyne.core.graph.LinksApi: Removes the vertex's links to a certain targetID of a given type.
removeLinksTo(long) - Method in class simudyne.core.graph.Vertex: Removes the vertex's links to a certain target ID.
removeLinksTo(long, Class<? extends Link>) - Method in class simudyne.core.graph.Vertex: Removes the vertex's links to a certain targetID of a given type.
report() - Method in interface simudyne.core.harness.ModelHarness
report(boolean) - Method in interface simudyne.core.harness.ModelHarness
reset() - Method in interface simudyne.core.graph.DoubleAccumulator: Reset the accumulator to 0.
reset() - Method in interface simudyne.core.graph.LongAccumulator: Reset the accumulator to 0.
RingConnected<A extends Agent<?>,T extends Link> - Class in simudyne.core.abm.connectors: The strategy used to create a ring of connections between agents of a group.
RingConnected(Class<T>, SerializableBiConsumer<A, T>) - Constructor for class simudyne.core.abm.connectors.RingConnected
ringConnected(Class<L>) - Method in interface simudyne.core.abm.Group: Group.ringConnected(Class, SerializableBiConsumer) without a data injector so no initial function is run for links.
ringConnected(Class<L>, SerializableBiConsumer<A, L>) - Method in interface simudyne.core.abm.Group: Connect agents within this group using the RingConnected strategy.
run(Section...) - Method in class simudyne.core.abm.AgentBasedModel
run(AgentSystem<S>) - Method in class simudyne.core.abm.Section: Convenience method for running this section on an AgentSystem.
run() - Method in interface simudyne.core.runner.ModelRunner: Start running the multi run simulation
run() - Static method in class simudyne.nexus.Server: Runs the webserver.
runAsync() - Method in interface simudyne.core.runner.ModelRunner: Start running the multi run simulation in the background, allowing you to track the progress with ModelRunner.getProgress()
RunnerBackend - Interface in simudyne.core.runner: RunnerBackend is used to create an instance of ModelRunner that can be used to run a simulation multiple times.
RunResult - Interface in simudyne.core.runner: RunResult provides methods that can be used to extract results of running a multi run simulation using ModelRunner
runSeed - Variable in exception simudyne.core.exceptions.SimudyneRunnerException

S

ScenarioException - Exception in simudyne.core.runner.scenario
ScenarioException(Throwable) - Constructor for exception simudyne.core.runner.scenario.ScenarioException
schema - Variable in class simudyne.core.runner.ModelAggregator
schema - Variable in class simudyne.core.runner.ModelRecordAggregator
Section - Class in simudyne.core.abm
Section() - Constructor for class simudyne.core.abm.Section
seed(long) - Method in class simudyne.core.abm.connectors.GraphConnector
seed(long) - Method in class simudyne.core.abm.connectors.SmallWorld
SeededRandom - Class in simudyne.core.rng: Provides a wrapper around Apache Commons Math3 PRNG functions.
SeededRandom(RandomGenerator) - Constructor for class simudyne.core.rng.SeededRandom
select(Class<A>) - Method in class simudyne.core.abm.AgentBasedModel
select(Class<T>) - Method in interface simudyne.core.abm.AgentSystem: Select all agents of a given type from the system.
selectVertices(Class<T>) - Method in interface simudyne.core.graph.Graph: Create a selection of agents from the system that can then be summarised.
send(Class<M>, Consumer<M>) - Method in class simudyne.core.abm.Agent
send(Class<M>) - Method in interface simudyne.core.graph.Environment: Environment.send(Class, Consumer) without a data injector so no initial function is run for messages.
send(Class<M>, Consumer<M>) - Method in interface simudyne.core.graph.Environment: Create a Messaging object for sending messages.
send(Class<M>, boolean) - Method in interface simudyne.core.graph.Environment: Create a Messaging object for sending messages with single boolean field.
send(Class<M>, float) - Method in interface simudyne.core.graph.Environment: Create a Messaging object for sending messages with single float field.
send(Class<M>, long) - Method in interface simudyne.core.graph.Environment: Create a Messaging object for sending messages with single long field.
send(Class<M>, double) - Method in interface simudyne.core.graph.Environment: Create a Messaging object for sending messages with single double field.
send(Class<M>, int) - Method in interface simudyne.core.graph.Environment: Create a Messaging object for sending messages with single int field.
send(Class<M>, T) - Method in interface simudyne.core.graph.Environment: Create a Messaging object for sending messages with single field.
send(Class<M>) - Method in interface simudyne.core.graph.FilteredLinks: LinkList.send(Class, BiConsumer) without a data injector so no initial function is run for messages.
send(Class<M>, BiConsumer<M, L>) - Method in interface simudyne.core.graph.FilteredLinks: Send the specified message to all links in this list.
send(Class<M>, boolean) - Method in interface simudyne.core.graph.FilteredLinks: Send the specified message with single boolean field to all links in this list.
send(Class<M>, float) - Method in interface simudyne.core.graph.FilteredLinks: Send the specified message with single float field to all links in this list.
send(Class<M>, long) - Method in interface simudyne.core.graph.FilteredLinks: Send the specified message with single long field to all links in this list.
send(Class<M>, double) - Method in interface simudyne.core.graph.FilteredLinks: Send the specified message with single double field to all links in this list.
send(Class<M>, int) - Method in interface simudyne.core.graph.FilteredLinks: Send the specified message with single int field to all links in this list.
send(Class<M>, T) - Method in interface simudyne.core.graph.FilteredLinks: Send the specified message with single field to all links in this list.
send(Class<M>) - Method in class simudyne.core.graph.LinkList: LinkList.send(Class, BiConsumer) without a data injector so no initial function is run for messages.
send(Class<M>, BiConsumer<M, L>) - Method in class simudyne.core.graph.LinkList: Send the specified message to all links in this list.
send(Class<M>, boolean) - Method in class simudyne.core.graph.LinkList: Send the specified message with single boolean field to all links in this list.
send(Class<M>, float) - Method in class simudyne.core.graph.LinkList: Send the specified message with single float field to all links in this list.
send(Class<M>, long) - Method in class simudyne.core.graph.LinkList: Send the specified message with single long field to all links in this list.
send(Class<M>, double) - Method in class simudyne.core.graph.LinkList: Send the specified message with single double field to all links in this list.
send(Class<M>, int) - Method in class simudyne.core.graph.LinkList: Send the specified message with single int field to all links in this list.
send(Class<M>, T) - Method in class simudyne.core.graph.LinkList: Send the specified message with single field to all links in this list.
Sequence - Class in simudyne.core.abm
Sequence(List<Section>) - Constructor for class simudyne.core.abm.Sequence
SerializableBiConsumer<T,U> - Interface in simudyne.core.functions: Helper interface for requiring a BiConsumer implementing Serializable.
SerializableConsumer<T> - Interface in simudyne.core.functions: Helper interface for requiring a Consumer implementing Serializable.
SerializableFunction<T,R> - Interface in simudyne.core.functions: Helper interface for requiring a Function implementing Serializable.
SerializablePredicate<T> - Interface in simudyne.core.functions: Helper interface for requiring a Predicate implementing Serializable.
SerializableSupplier<T> - Interface in simudyne.core.functions: Helper interface for requiring a Supplier implementing Serializable.
Server - Class in simudyne.nexus
setAutoCompileRoot(String) - Static method in class simudyne.nexus.Server: Enables auto-compilation of Java files in the specified directory.
setBody(boolean) - Method in class simudyne.core.graph.Message.Boolean
setBody(double) - Method in class simudyne.core.graph.Message.Double
setBody(float) - Method in class simudyne.core.graph.Message.Float
setBody(int) - Method in class simudyne.core.graph.Message.Integer
setBody(long) - Method in class simudyne.core.graph.Message.Long
setBody(T) - Method in class simudyne.core.graph.Message.Object
setBoolean(String, boolean) - Method in class simudyne.core.config.ModelConfig
setHostname(String) - Static method in class simudyne.nexus.Server: Sets the hostname the webserver binds to.
setInt(String, int) - Method in class simudyne.core.config.ModelConfig
setLong(String, long) - Method in class simudyne.core.config.ModelConfig
setMessageTag(long) - Method in class simudyne.core.abm.Agent
setMessageTag(long) - Method in interface simudyne.core.graph.Environment: Set the value of the message tag which will be embedded in each message sent by this Environment.
setPersistent(boolean) - Method in interface simudyne.core.graph.DoubleAccumulator: make the accumulator persitent for beginStep.
setPersistent(boolean) - Method in interface simudyne.core.graph.LongAccumulator: make the accumulator persitent for beginStep.
setPort(int) - Static method in class simudyne.nexus.Server: Sets the port for the webserver.
setSeed(long) - Method in class simudyne.core.rng.XoRoShiRo128Plus
setState(long[]) - Method in class simudyne.core.rng.XoRoShiRo128Plus
setString(String, String) - Method in class simudyne.core.config.ModelConfig
setup() - Method in class simudyne.core.abm.AgentBasedModel
setup() - Method in interface simudyne.core.abm.AgentSystem
setup() - Method in interface simudyne.core.graph.Graph: Initialise the agent system.
setup() - Method in interface simudyne.core.harness.ModelHarness
setup() - Method in interface simudyne.core.Model: An optional lifecycle point at which to take configured initial parameters and initialise required internal state.
setWebserverRoot(String) - Static method in class simudyne.nexus.Server: Sets the root directory from which to serve files from the webserver.
shard() - Method in class simudyne.core.abm.connectors.PartitionConnected
simudyne.core - package simudyne.core
simudyne.core.abm - package simudyne.core.abm
simudyne.core.abm.connectors - package simudyne.core.abm.connectors
simudyne.core.abm.messages - package simudyne.core.abm.messages
simudyne.core.abm.stats - package simudyne.core.abm.stats
simudyne.core.annotations - package simudyne.core.annotations
simudyne.core.config - package simudyne.core.config
simudyne.core.data - package simudyne.core.data
simudyne.core.data.graph - package simudyne.core.data.graph
simudyne.core.descriptors - package simudyne.core.descriptors
simudyne.core.exceptions - package simudyne.core.exceptions
simudyne.core.functions - package simudyne.core.functions
simudyne.core.graph - package simudyne.core.graph
simudyne.core.harness - package simudyne.core.harness
simudyne.core.license - package simudyne.core.license
simudyne.core.rng - package simudyne.core.rng
simudyne.core.runner - package simudyne.core.runner
simudyne.core.runner.scenario - package simudyne.core.runner.scenario
simudyne.core.util - package simudyne.core.util
simudyne.core.values - package simudyne.core.values
simudyne.nexus - package simudyne.nexus
SimudyneAccumulatorNotFoundException - Exception in simudyne.core.exceptions: Exception used for error where the stack trace should not be shown to the user.
SimudyneAccumulatorNotFoundException(String, String) - Constructor for exception simudyne.core.exceptions.SimudyneAccumulatorNotFoundException
SimudyneCompilerException - Exception in simudyne.core.exceptions
SimudyneCompilerException(String) - Constructor for exception simudyne.core.exceptions.SimudyneCompilerException
SimudyneLicenseException - Exception in simudyne.core.license
SimudyneLicenseException(String) - Constructor for exception simudyne.core.license.SimudyneLicenseException
SimudyneLicenseException(String, Throwable) - Constructor for exception simudyne.core.license.SimudyneLicenseException
SimudyneNewAccumulatorException - Exception in simudyne.core.exceptions
SimudyneNewAccumulatorException(String) - Constructor for exception simudyne.core.exceptions.SimudyneNewAccumulatorException
SimudyneRunnerException - Exception in simudyne.core.exceptions: Exception used for error where the stack trace should not be shown to the user.
SimudyneRunnerException(String, Throwable, long) - Constructor for exception simudyne.core.exceptions.SimudyneRunnerException
SimudyneSDKException - Exception in simudyne.core.exceptions: Exception used for error where the stack trace should not be shown to the user.
SimudyneSDKException(String) - Constructor for exception simudyne.core.exceptions.SimudyneSDKException
SimudyneSDKException(String, Throwable) - Constructor for exception simudyne.core.exceptions.SimudyneSDKException
size() - Method in interface simudyne.core.graph.FilteredLinks
size() - Method in class simudyne.core.graph.LinkList
SmallWorld<A extends Agent<?>,T extends Link> - Class in simudyne.core.abm.connectors
SmallWorld(Class<T>, SerializableBiConsumer<A, T>, int, double) - Constructor for class simudyne.core.abm.connectors.SmallWorld
smallWorldConnected(int, double, Class<L>) - Method in interface simudyne.core.abm.Group: Group.smallWorldConnected(int, double, Class, SerializableBiConsumer) without a data injector so no initial function is run for links.
smallWorldConnected(int, double, Class<L>, SerializableBiConsumer<A, L>) - Method in interface simudyne.core.abm.Group: Connect agents within this group using the SmallWorld strategy.
Source - Interface in simudyne.core.data
split(Section...) - Method in class simudyne.core.abm.Section: Fluent method for adding a split to a Section to create a new Sequence
split(Section...) - Method in class simudyne.core.abm.Sequence: Extends this sequence with a new split, returning a new sequence (and not modifying the existing sequence).
Split - Class in simudyne.core.abm
Split(Section[]) - Constructor for class simudyne.core.abm.Split
stateFromSeed(long) - Method in class simudyne.core.rng.StateGenerator
StateGenerator - Class in simudyne.core.rng: Generate an initial state using an md5 hash of the given seed.
StateGenerator() - Constructor for class simudyne.core.rng.StateGenerator
stats(Class<A>) - Method in class simudyne.core.abm.AgentBasedModel
stats() - Method in interface simudyne.core.abm.AgentSelection: Return an AgentStatistics instance using the current selection.
stats(Class<T>) - Method in interface simudyne.core.abm.AgentSystem: Select all agents of a given type from the system, for summarization through AgentStatistics.
step(Environment<S>) - Method in class simudyne.core.abm.Agent
step() - Method in class simudyne.core.abm.AgentBasedModel
step(Message) - Method in interface simudyne.core.graph.Graph: Run a messaging phase on the agents.
step(Environment<SER>) - Method in class simudyne.core.graph.Vertex
step() - Method in interface simudyne.core.harness.ModelHarness
step() - Method in interface simudyne.core.Model: Required lifecycle method for implementing the calculation of a model.
stop() - Method in class simudyne.core.abm.Agent
stop() - Method in interface simudyne.core.graph.Environment: Allow an vertex to stop it self.
stream() - Method in interface simudyne.core.graph.FilteredLinks
stream() - Method in class simudyne.core.graph.LinkList
system - Variable in class simudyne.core.abm.AgentBasedModel

T

t(double) - Method in class simudyne.core.rng.SeededRandom: Returns a generator for the Student's T Distribution, with given degrees of freedom.
threadLocal - Static variable in class simudyne.core.rng.StateGenerator
tickTime - Variable in class simudyne.core.runner.ModelAggregator
tickTime - Variable in class simudyne.core.runner.ModelRecordAggregator
to(long) - Method in interface simudyne.core.graph.Messaging: Send the message to a specific vertex by id.
triangular(double, double, double) - Method in class simudyne.core.rng.SeededRandom: Returns a generator for the Triangular distribution, with given parameters.

U

uncentered() - Method in class simudyne.core.abm.connectors.BananaTree
uniform(double, double) - Method in class simudyne.core.rng.SeededRandom: Returns a generator of floating point values in the range lower <= n < upper

V

value() - Method in interface simudyne.core.graph.DoubleAccumulator
value() - Method in interface simudyne.core.graph.LongAccumulator
ValueArray<T extends ValueNode> - Class in simudyne.core.values
ValueArray(String, Subtype, List<T>) - Constructor for class simudyne.core.values.ValueArray
ValueArray(String, List<T>) - Constructor for class simudyne.core.values.ValueArray
ValueArray(String) - Constructor for class simudyne.core.values.ValueArray
ValueField<T> - Class in simudyne.core.values
ValueField(String, T) - Constructor for class simudyne.core.values.ValueField
ValueNode - Interface in simudyne.core.values
valueOf(String) - Static method in enum simudyne.core.ModelExecutionPhase: Returns the enum constant of this type with the specified name.
ValueRecord - Class in simudyne.core.values
ValueRecord(String, Subtype, List<ValueNode>) - Constructor for class simudyne.core.values.ValueRecord
ValueRecord(String, Subtype) - Constructor for class simudyne.core.values.ValueRecord
ValueRecord(String, List<ValueNode>) - Constructor for class simudyne.core.values.ValueRecord
ValueRecord(String) - Constructor for class simudyne.core.values.ValueRecord
values() - Static method in enum simudyne.core.ModelExecutionPhase: Returns an array containing the constants of this enum type, in the order they are declared.
Variable - Annotation Type in simudyne.core.annotations: Marks a field or method as a Variable.
VariableResult - Interface in simudyne.core.runner: VariableResult provides methods that can be used to retrieve multi run results for a model output as DescriptiveStatistics
Vertex<SER extends java.io.Serializable> - Class in simudyne.core.graph
Vertex() - Constructor for class simudyne.core.graph.Vertex
VertexAggregator<T extends Vertex,S extends VertexAggregator<T,S>> - Interface in simudyne.core.graph: The VertexAggregator interface allows the definition of a custom aggregator that can be used to collect vertex data for reporting.
VertexSelection<T extends Vertex> - Interface in simudyne.core.graph: AgentSelections allow the collection of statistics on selections of agents of the same type within an Graph.
vonNeumannConnected() - Method in class simudyne.core.abm.connectors.GridConnected
vonNeumannConnected(int) - Method in class simudyne.core.abm.connectors.GridConnected

W

weave() - Method in class simudyne.core.abm.connectors.PartitionConnected
weibull(double, double) - Method in class simudyne.core.rng.SeededRandom: Returns a generator for the Weibull distribution, with given parameters.
width(long) - Method in class simudyne.core.abm.connectors.GridConnected
withCustomMetadata(String) - Method in interface simudyne.core.runner.ModelRunner: Set metadata to be exported.
withExportPath(String) - Method in interface simudyne.core.runner.ModelRunner: Set sub directory to export this models data to.
withFromHeader(String) - Method in interface simudyne.core.abm.connectors.DataConnector: Change the header to use to identify sources id.
withInput(String) - Method in interface simudyne.core.runner.ModelRunner: Set values of model fields marked Input or Constant
withScenario(ScenarioRunRequest, String) - Method in interface simudyne.core.runner.ModelRunner
withSeparator(char) - Method in class simudyne.core.data.CSVSource
withToHeader(String) - Method in interface simudyne.core.abm.connectors.DataConnector: Change the header to use to identify targets id.
wrapped() - Method in class simudyne.core.abm.connectors.GridConnected
writeData(DataExporter) - Method in interface simudyne.core.harness.ModelHarness: Write the current tick data to the dataExporter.

X

XoRoShiRo128Plus - Class in simudyne.core.rng
XoRoShiRo128Plus() - Constructor for class simudyne.core.rng.XoRoShiRo128Plus
XoRoShiRo128Plus(long) - Constructor for class simudyne.core.rng.XoRoShiRo128Plus
XoRoShiRo128Plus(long[]) - Constructor for class simudyne.core.rng.XoRoShiRo128Plus

Z

zipf(int, double) - Method in class simudyne.core.rng.SeededRandom: Returns a generator for the Zipf Distribution

A B C D E F G H I J L M N O P R S T U V W X Z